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[[ -d $HOME/.nextflow ]] || mkdir -p $HOME/.nextflow cat <<EOF > $HOME/.nextflow/config singularity { cacheDir = '$HOME/.nextflow/NXF_SINGULARITY_CACHEDIR' autoMounts = true } conda { cacheDir = '$HOME/.nextflow/NXF_CONDA_CACHEDIR' } process { executor = 'pbspro' scratch = truefalse cleanup = false } EOF |
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