This page provides a basic introduction to Unix commands to HPC users with no previous knowledge.
Pre-requisites:
Review this 1 hour long detailed introduction to VIM editor: https://www.youtube.com/watch?v=IiwGbcd8S7I
Log into the HPC
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ssh userID@lyra.qut.edu.au |
Brief basic Unix commands
Once you log into the HPC, you will land in your personal home space (i.e. /home/myStudentID/). This space is only accessible to you. To work in collaboration with others we use workspaces (i.e. /work/myProjectName/).
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qsub -I -S /bin/bash -l walltime=10:00:00 -l select=1:ncpus=2:mem=4gb |
Downloading public RNA-seq data from ENA
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Go to the following directory
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