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NOTE: I’ve selected 16 CPUs and 128gb of memory. This is based on testing of the Nextflow workflows we’ll be using and their CPU/memory requirements.
Additional interactive job for running Nanopore analysis (may start quicker as fewer resources)
| Code Block |
|---|
qsub -I -S /bin/bash -l walltime=4:00:00 -l select=1:ncpus=5:mem=12gb |
Create working directories
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