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The analysis also requires the metadata.tsv file we created at the start of last workshop. Check to see if this file is in Z:\meta_workshop\illumina\data

If

Open PuTTY and run the following to create today’s workshop folder:

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you don’t have

Code Block
cp -r /work/training/metagenomics/public_data/Illumina/results $HOME/meta_workshop/R_analysis

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illumina
cp -r /work/training/metagenomics/public_data/Illumina/

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data/metadata.tsv $HOME/meta_workshop/illumina/data

We’ll need to

Open PuTTY and run the following to create today’s workshop folder:

Code Block
mkdir $HOME/home/whatmorp/meta_workshop/

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R_analysis

Code Block