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ampvisdata$metadata[[group]] <- factor(ampvisdata$metadata[[group]], levels = lev)

 

5b. PCoA plots and statistics

The overview section described (with links and references) the ordination methods that can be used to estimate and plot beta diversity.

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Code Block
write_csv(tabstat_adonis, paste0("beta_div_pairwise_PERMANOVA", group, "_", index, "_samples_.csv"))

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