...
Let’s have a look at the nf-core/rnaseq pipeline:
...
All the parameters available will also be listed under the Parameters section:
...
Using the usage and parameters sections, search how many aligner options are available for the nf-core rnaseq pipeline version 3.1415.0 1.
| Expand | ||
|---|---|---|
| ||
There are 3 aligner algorithms available: 'star_salmon', 'star_rsem' and 'hisat2'. Star_salmon is the one that is run by default. |
Specifying parameters on the command line
...