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Test bisulfate conversion rate
See email from Vikki 12-02-2023.
Hi Roberto and Paul,
The Bisulfate test run has completed if you could still help with checking the conversion efficiency?
Here’s the links to BaseSpace:
Run:
https://basespace.illumina.com/s/5q9a660K45Cn
Project:
https://basespace.illumina.com/s/IcYF0SmLrTeY
Sample “test 1” should be the converted sample and the “test 2” should be the non-converted DNA.
Thank you and let me know if you have any questions.
Best wishes,
Vikki
Download data from Basespace.
Followed this guide: Downloading data from BaseSpace
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Raw data downloaded to /work/eresearch_bio/projects/CARF/Alison_Carey_WGBS/data
Initial data management
Fastq files moved to /work/eresearch_bio/projects/CARF/Alison_Carey_WGBS/fastq
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