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Monitor progress

Code Block
qjobs

working example:

Code Block
/work/phylo/OxfordNanopore/nextflow/variants/nano-Q/run2

Additional information

Code Block
#generic mapping reads
minimap2 -a ref.fa ont-reads.fq > aln.sam

#mapping noisy reads
minimap2 -ax map-ont ref.fa ont-reads.fq > aln.sam      # for Oxford Nanopore reads

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