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#!/bin/bash -l
#PBS -N fetchBaseSpace
#PBS -l walltime=24:00:00
#PBS -l mem=32gb
#PBS -l ncpus=8
#PBS -m bae
###PBS#PBS -M email@host
#PBS -j oe

cd $PBS_O_WORKDIR

#fetch data from BaseSpace by indicating the Project ID (-i parameter)
bs download project -i 357263934 -o /my/project/raw_data --extension=fastq.gz