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#!/bin/bash -l #PBS -N fetchBaseSpace #PBS -l walltime=24:00:00 #PBS -l mem=32gb #PBS -l ncpus=8 #PBS -m bae #PBS -M email@host #PBS -j oe cd $PBS_O_WORKDIR #fetch data from BaseSpace by indicating the Project ID (-i parameter) bs download project -i-name 357263934 -o /my/project/raw_data --extension=fastq.gz |
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