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2024-2 eResearch - Session 7: DE using R for smRNAseq

2024-2 eResearch - Session 7: DE using R for smRNAseq

Owned by Vicki Thomson
Last updated: Oct 28, 2024
1 min read

Acknowledgements: This training material was originally developed by Paul Whatmore as part of the QUT eResearch infrastructure. It is free to distribute but we just require that you acknowledge eResearch for any outputs (e.g. training, presentation slides, publications) that might result from using this training material.

Overview-of-the-experimental-steps-in-a-RNA-seq-protocol-The-cDNA-library-is-generated.png

Differential expression analysis are over the following pages:

2024-2: 7a.1 DE analysis for smallRNASeq against mirBase

2024-2: 7b-Exercises - MirGeneDB

2024-2: 7c.2 Running R scripts on the HPC

2024-2: 7c.3 Installing R packages on the HPC

2024-2: 7d.1 Homework

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